Publications
INTERNATIONAL JOURNALS [SCI(E)]
* Authors contributed equally to this work.
1. Ha HS*, Moon JW*, Gim JA, Jung YD, Ahn K, Oh KB, Kim TH, Seong HH, and Kim HS. Identification and characterization of transposable element chimeric transcripts from porcine Refseq and EST database. Genes & Genomics. 2012 (accepted) [SCIE]
2. Ha HS*, Lee YC*, Park SJ, Jung YD, Ahn K, Moon JW, Han K, Oh KB, Kim TH, Seong HH, and Kim HS. In vitro CpG methylation and garcinol reduce PERV LTR promoter activity. Genes & Genomics. 2011 (accepted) [SCIE]
3. Jung YD, Huh JW, Kim DS, Kim YJ, Ahn K, Ha HS, Lee JR, Yi JM, Moon JW, Kim TO, Song GA, Han K, Kim HS. Quantitative analysis of transcript variants of CHM gene containing LTR12C element in humans. Gene. 2011 [Epub ahead of print] [SCI]
4. Ha HS*, Chung WK*, Ahn K, Bae JH, Park SJ, Moon JW, Nam KH, Han K, Cho HG, Kim HS. Development of GEBRET: a web-based analysis tool for retroelements in primate genomes. Genes & Genomics. 2011 [Epub ahead of print] [SCIE]
5. Ha HS, Huh JW, Han K and Kim HS. Transcriptional variations mediated by an alternative promoter of the FPR3 gene. Mammalian Genome. 2011 [Epub ahead of print] [SCI]
6. Park SJ, Huh JW, Kim DS, Ha HS, Jung YD, Ahn K, Oh KB, Park EW, Chang KT, Kim HS. Analysis of the molecular and regulatory properties of active porcin endogenous retrovirus gamma-1 long terminal repeats in kidney tissues of the NIH-miniature pig. Mol Cells. 2010 30:319-325 [SCI]
7. Ahn K, Huh JW, Kim DS, Ha HS, Kim YJ, Lee JR, Kim HS. Quantitative analysis of alternative transcripts of human PCDH11X/Y genes. Am J Med Genet B Neuropsychiatr Genet. 2010 153B(3):736-744
8. Lee JR, Huh JW, Kim DS, Ha HS, Ahn K, Kim YJ, Chang KT, Kim HS. Lineage specific evolutionary events on SFTPB gene: Alu recombination-mediated deletion (ARMD), exonization, and alternative splicing events. Gene. 2009 435(1-2):29-35. [SCI]
9. Kim YJ, Huh JW, Kim DS, Bae MI, Lee JR, Ha HS, Ahn K, Kim TO, Song GA, Kim HS. Molecular characterization of the DYX1C1 gene and its application as
a cancer biomarker. J Cancer Res Clin Oncol. 2009 135(2):265-270. [SCI]
10. Huh JW, Kim DS, Ha HS, Lee JR, Kim YJ, Ahn K, Lee SR, Chang KT, Kim HS. Cooperative exonization of MaLR and AluJo elements contributed an alternative promoter and novel splice variants of RNF19. Gene. 2008 424(1-2):63-70. [SCI]
11. Huh JW, Kim DS, Kang DW, Ha HS, Ahn K, Noh YN, Min DS, Chang KT, Kim HS. Transcriptional regulation of GSDML gene by antisense-oriented HERV-H LTR element. Arch Virol. 2008 153(6):1201-1205. [SCI]
12. Huh JW*, Ha HS*, Kim DS, Kim HS. Placenta-restricted expression of LTR-derived NOS3. Placenta. 2008 29(7):602-608. [SCI]
13. Huh JW, Cho BW, Kim DS, Ha HS, Noh YN, Yi JM, Lee WH, Kim HS. Long terminal repeats of porcine endogenous retroviruses in Sus scrofa. Arch Virol. 2007 152(12):2271-2276. [SCI]
14. Sin HS, Huh JW, Kim DS, Kim TH, Ha HS, Kim WY, Park HK, Kim CM, Kim HS. Endogenous retrovirus-related sequences provide an alternative transcript of MCJ genes in human tissues and cancer cells. Genes Genet Syst. 2006 81(5):333-339. [SCI]
15. Sin HS, Huh JW, Kim DS, Kang DW, Min DS, Kim TH, Ha HS, Kim HH, Lee SY, Kim HS. Transcriptional control of the HERV-H LTR element of the GSDML gene in human tissues and cancer cells. Arch Virol. 2006 151(10):1985-1994. [SCI]
16. Ahn K, Huh JW, Park SJ, Kim DS, Ha HS, Kim YJ, Lee JR, Chang KT, Kim HS. Selection of internal reference genes for SYBR green qRT-PCR studies of rhesus monkey (Macaca mulatta) tissues. BMC Mol Biol. 2008 [SCIE]
17. Huh JW, Kim DS, Ha HS, Ahn K, Chang KT, Cho BW, Kim HS. Identification and molecular characterization of PERV gamma1 long terminal repeats. Mol Cells. 2009 27(1):119-123. [SCI]
18. Huh JW, Kim DS, Noh YN, Park SJ, Ha HS, Kim CG, Lee YH, Kang CK, Chang KT , Kim HS. Dynamic evolution of tRNAThr-Derived HpaI SINEs and effect on genomes of oncorhynchus species. Genes & Genomics. 2009 31(3):217-226 [SCIE]
19. Ha HS*, Huh JW*, Kim DS, Kang DW, Cho BW, Kim HS. Promoter activity of the long terminal repeats of porcine endogenous retroviruses of the Korean domestic pig. Mol Cells. 2007 24(1):148-151. [SCI]
20. Sin HS, Huh JW, Kim WY, Kim DS Ahn, K, Ha HS, Kim HS. Long terminal repeats of human endogenous retrovirus H family provide alternative polyadenylation signals to NADSYN1 Gene. Korean J. Genetics. 2007 29(3):395-401 [SCIE]
21. Huh JW*, Ha HS*, Kim DS, Cho BW, Kim HS. Transient transfection analysis of long terminal repeats of porcine endogenous retroviruses in sus scrofa coreanus. Korean J. Genetics. 2007 29(3):403-407 [SCIE]
22. Huh JW*, Ha HS*, Kim YJ, Lee JR, Kim DS, Cho BW, Kim HS. Methylation and promoter activity of long terminal repeats from porcine endogenous retroviruses in the pig, sus scrofa. Korean J. Genetics. 2007 29(2):171-176 [SCIE]
23. Huh JW, Kim DS, Ha HS, Kim TH, Kim W, Kim HS. Formation of a new solo-LTR of the human endogenous retrovirus H family in human chromosome 21. Mol Cells. 2006 22(3):360-363. [SCI]
DOMESTIC JOURNALS
24. Ha HS, Huh JW, Kim DS, Park SJ, Bae JH, Ahn K, Yun SE, Kim HS. Analysis of Trans-splicing Transcripts in Embryonic Stem Cell. Journal of life science. 2009 19(4): 549-552 (first author)
25. Cho CY, Park SH, Kim DS, Ha HS, Ahn K, Kim HS, Cho HG. Development of Whole Genome Visualization Component Ware for Evolutionary Genetic Analysis. Korea Information Science Society 2008 35(1): 198-202
26. Huh JW, Kim WY, Kim DS, Ha HS, Lee JR, Choi OH, Nam KM, Bae HJ, Choi J, Kim HS. Comparative analysis of Y chromosomal microdeletions in Korean infertile men of 47,XXY and 46,XY karyotypes. Journal of life science. 2007 17(6):741-747
27. Expression analysis of RBMY1, CDY1, and VCY2 genes in Korean male infertility. Huh JW, Kim WY, Kim DS, Ha HS, Park NC, Choi OH, Nam KM, Choi J, Kim HS. Journal of life science. 2007 7(5):613-618
28. Kim DS, Huh JW, Ha HS, Kim TH, Jo UJ, Kim HS. Bioinformatics analysis of gene expression regulation by transposable elements in dementia patient. Journal of life science. 2006 16(7):1188-1194
INTERNATIONAL JOURNALS [SCI(E)]
* Authors contributed equally to this work.
1. Ha HS*, Moon JW*, Gim JA, Jung YD, Ahn K, Oh KB, Kim TH, Seong HH, and Kim HS. Identification and characterization of transposable element chimeric transcripts from porcine Refseq and EST database. Genes & Genomics. 2012 (accepted) [SCIE]
2. Ha HS*, Lee YC*, Park SJ, Jung YD, Ahn K, Moon JW, Han K, Oh KB, Kim TH, Seong HH, and Kim HS. In vitro CpG methylation and garcinol reduce PERV LTR promoter activity. Genes & Genomics. 2011 (accepted) [SCIE]
3. Jung YD, Huh JW, Kim DS, Kim YJ, Ahn K, Ha HS, Lee JR, Yi JM, Moon JW, Kim TO, Song GA, Han K, Kim HS. Quantitative analysis of transcript variants of CHM gene containing LTR12C element in humans. Gene. 2011 [Epub ahead of print] [SCI]
4. Ha HS*, Chung WK*, Ahn K, Bae JH, Park SJ, Moon JW, Nam KH, Han K, Cho HG, Kim HS. Development of GEBRET: a web-based analysis tool for retroelements in primate genomes. Genes & Genomics. 2011 [Epub ahead of print] [SCIE]
5. Ha HS, Huh JW, Han K and Kim HS. Transcriptional variations mediated by an alternative promoter of the FPR3 gene. Mammalian Genome. 2011 [Epub ahead of print] [SCI]
6. Park SJ, Huh JW, Kim DS, Ha HS, Jung YD, Ahn K, Oh KB, Park EW, Chang KT, Kim HS. Analysis of the molecular and regulatory properties of active porcin endogenous retrovirus gamma-1 long terminal repeats in kidney tissues of the NIH-miniature pig. Mol Cells. 2010 30:319-325 [SCI]
7. Ahn K, Huh JW, Kim DS, Ha HS, Kim YJ, Lee JR, Kim HS. Quantitative analysis of alternative transcripts of human PCDH11X/Y genes. Am J Med Genet B Neuropsychiatr Genet. 2010 153B(3):736-744
8. Lee JR, Huh JW, Kim DS, Ha HS, Ahn K, Kim YJ, Chang KT, Kim HS. Lineage specific evolutionary events on SFTPB gene: Alu recombination-mediated deletion (ARMD), exonization, and alternative splicing events. Gene. 2009 435(1-2):29-35. [SCI]
9. Kim YJ, Huh JW, Kim DS, Bae MI, Lee JR, Ha HS, Ahn K, Kim TO, Song GA, Kim HS. Molecular characterization of the DYX1C1 gene and its application as
a cancer biomarker. J Cancer Res Clin Oncol. 2009 135(2):265-270. [SCI]
10. Huh JW, Kim DS, Ha HS, Lee JR, Kim YJ, Ahn K, Lee SR, Chang KT, Kim HS. Cooperative exonization of MaLR and AluJo elements contributed an alternative promoter and novel splice variants of RNF19. Gene. 2008 424(1-2):63-70. [SCI]
11. Huh JW, Kim DS, Kang DW, Ha HS, Ahn K, Noh YN, Min DS, Chang KT, Kim HS. Transcriptional regulation of GSDML gene by antisense-oriented HERV-H LTR element. Arch Virol. 2008 153(6):1201-1205. [SCI]
12. Huh JW*, Ha HS*, Kim DS, Kim HS. Placenta-restricted expression of LTR-derived NOS3. Placenta. 2008 29(7):602-608. [SCI]
13. Huh JW, Cho BW, Kim DS, Ha HS, Noh YN, Yi JM, Lee WH, Kim HS. Long terminal repeats of porcine endogenous retroviruses in Sus scrofa. Arch Virol. 2007 152(12):2271-2276. [SCI]
14. Sin HS, Huh JW, Kim DS, Kim TH, Ha HS, Kim WY, Park HK, Kim CM, Kim HS. Endogenous retrovirus-related sequences provide an alternative transcript of MCJ genes in human tissues and cancer cells. Genes Genet Syst. 2006 81(5):333-339. [SCI]
15. Sin HS, Huh JW, Kim DS, Kang DW, Min DS, Kim TH, Ha HS, Kim HH, Lee SY, Kim HS. Transcriptional control of the HERV-H LTR element of the GSDML gene in human tissues and cancer cells. Arch Virol. 2006 151(10):1985-1994. [SCI]
16. Ahn K, Huh JW, Park SJ, Kim DS, Ha HS, Kim YJ, Lee JR, Chang KT, Kim HS. Selection of internal reference genes for SYBR green qRT-PCR studies of rhesus monkey (Macaca mulatta) tissues. BMC Mol Biol. 2008 [SCIE]
17. Huh JW, Kim DS, Ha HS, Ahn K, Chang KT, Cho BW, Kim HS. Identification and molecular characterization of PERV gamma1 long terminal repeats. Mol Cells. 2009 27(1):119-123. [SCI]
18. Huh JW, Kim DS, Noh YN, Park SJ, Ha HS, Kim CG, Lee YH, Kang CK, Chang KT , Kim HS. Dynamic evolution of tRNAThr-Derived HpaI SINEs and effect on genomes of oncorhynchus species. Genes & Genomics. 2009 31(3):217-226 [SCIE]
19. Ha HS*, Huh JW*, Kim DS, Kang DW, Cho BW, Kim HS. Promoter activity of the long terminal repeats of porcine endogenous retroviruses of the Korean domestic pig. Mol Cells. 2007 24(1):148-151. [SCI]
20. Sin HS, Huh JW, Kim WY, Kim DS Ahn, K, Ha HS, Kim HS. Long terminal repeats of human endogenous retrovirus H family provide alternative polyadenylation signals to NADSYN1 Gene. Korean J. Genetics. 2007 29(3):395-401 [SCIE]
21. Huh JW*, Ha HS*, Kim DS, Cho BW, Kim HS. Transient transfection analysis of long terminal repeats of porcine endogenous retroviruses in sus scrofa coreanus. Korean J. Genetics. 2007 29(3):403-407 [SCIE]
22. Huh JW*, Ha HS*, Kim YJ, Lee JR, Kim DS, Cho BW, Kim HS. Methylation and promoter activity of long terminal repeats from porcine endogenous retroviruses in the pig, sus scrofa. Korean J. Genetics. 2007 29(2):171-176 [SCIE]
23. Huh JW, Kim DS, Ha HS, Kim TH, Kim W, Kim HS. Formation of a new solo-LTR of the human endogenous retrovirus H family in human chromosome 21. Mol Cells. 2006 22(3):360-363. [SCI]
DOMESTIC JOURNALS
24. Ha HS, Huh JW, Kim DS, Park SJ, Bae JH, Ahn K, Yun SE, Kim HS. Analysis of Trans-splicing Transcripts in Embryonic Stem Cell. Journal of life science. 2009 19(4): 549-552 (first author)
25. Cho CY, Park SH, Kim DS, Ha HS, Ahn K, Kim HS, Cho HG. Development of Whole Genome Visualization Component Ware for Evolutionary Genetic Analysis. Korea Information Science Society 2008 35(1): 198-202
26. Huh JW, Kim WY, Kim DS, Ha HS, Lee JR, Choi OH, Nam KM, Bae HJ, Choi J, Kim HS. Comparative analysis of Y chromosomal microdeletions in Korean infertile men of 47,XXY and 46,XY karyotypes. Journal of life science. 2007 17(6):741-747
27. Expression analysis of RBMY1, CDY1, and VCY2 genes in Korean male infertility. Huh JW, Kim WY, Kim DS, Ha HS, Park NC, Choi OH, Nam KM, Choi J, Kim HS. Journal of life science. 2007 7(5):613-618
28. Kim DS, Huh JW, Ha HS, Kim TH, Jo UJ, Kim HS. Bioinformatics analysis of gene expression regulation by transposable elements in dementia patient. Journal of life science. 2006 16(7):1188-1194